rs48175350 SNP Detail

Summary

• ID
  rs48175350
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:50620859 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGAAGAAGA GCGAGAGATC
  TTCACTGCTG AGCCATCTCC AGCCTAAAAA TCTGATGTAT TTTAAGTATT ATACTGTGGC
  AAAAAAAAAA AAAAAATTCC CGATTTGGGG GGCATTTGGA TTTCCCACAG TACTTAGCTG
  GGTAAATGCT CAACTCATTT TTTTATTTCT AACAATGCAT AATCTGAAGC ATTGGGTCCA
  R
  GAATTCTGAG TGAGGGACAC TCAGCCCGAA CTCAGACTCA CATCACAAAT AAATCACAAT
  CGCACACTTG GCTATTTTTC TTTGACACAT ACTTAAGTCT TTATTTATTT TTATAGATTT
  TTCCTTTTGT TTCCTGAAAA CAGGAATGAT AATATCTATT TTCTAAGGGT ATGATGGCCA
  AATCAATTCA CACAAGATAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss136479841	ENSMUSSNP751629	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs48175350					SNP	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:50620859 () rs orientation: forward

Symbol	Name	Function Class
Dixdc1	DIX domain containing 1	within coordinates
Gm39337	predicted gene, 39337	within coordinates