rs48175445 SNP Detail

Summary

• ID
  rs48175445
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:50961498 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CATGT GCTGGTGTCG ACTGGATGCA
  A
  CCAAGGGTGC TCTCTCATTT CCTGT                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss146549244	ENSMUSSNP5874880	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	A
ss320293363	CHEV_2_50927006	CHEVERUD	SCREENING_POP	f	SNP				A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs48175445					SNP	A	A	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:50961498 () rs orientation: forward

Symbol	Name	Function Class
Gm32360	predicted gene, 32360	1499 bp downstream
Rr556806	regulatory region 556806	977 bp proximal
Rr556807	regulatory region 556807	1643 bp proximal