rs48183068 SNP Detail

Summary

• ID
  rs48183068
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:19279205 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GACTAATAAT GTCTGTGTCC
  ACATAATTTG GAGCACAGAA GTCAACAGTG GCTTCCCTCT AGAAACCTTC CATCCTTACT
  TTTGGTCTTT TGTTTCTTGC AGAATAAAGG TTGAAGAATA AGGAACAACT AACAGGAATC
  AAAGTACTTA TCTGAATGAG AGACAAGAAC TGCTAGGGTC TCTTGTTAGA AATGAAAGGA
  R
  AAAGAAATTA TTTTAAGTGG GTAAATAAAG TAGGAGGCAG TGAAGACAAG CCTGTCTGAA
  AGATGAAAAT GAGATGAAGC AGTAAAATAG GCAGTCATGA ATAGGTAGCC CCCTCGGCTA
  ATTTCGGGCA GCGCTCCTTC CTTACTATGC TGGTAATATA CTGGACAGTT CTCTGTGTAT
  AATGCTTTTT GGAAAGGAGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	MSM/Ms
ss146316339	ENSMUSSNP5529474	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	MSM/Ms
rs48183068					SNP	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:19279205 () rs orientation: forward

Symbol	Name	Function Class
Armc3	armadillo repeat containing 3	Intron
Rr396792	regulatory region 396792	1994 bp upstream
Rr552446	regulatory region 552446	396 bp proximal
Rr552447	regulatory region 552447	1319 bp proximal