rs48183723 SNP Detail

Summary

• ID
  rs48183723
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:34574301 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTTATGCTC ATGATAGATT
  AAGTGGCAGC ACACAGCAAA TGGTTTATTT ACTGTGCAGT CTATTAGGTC TGAGCATGAA
  GATGTTTTGT TATGAATCGA GTTAGGAGGT TCTGTAGACC CAAGAAGTGT TCTACCTGTT
  CACGTTTACA CTGGGGAGAT AAGGTGCACA CTTCCATCCA CAGTAGTCAA GGCCTGGTTT
  Y
  GAACTGAATG TAGCTATTCA AAGCAACATT TCGAAGTCTG AATCTGCTTG CTTTTGGAAG
  CATACTGCTT CTGTTGTGTG CTATGAGGGA AAGCTTAGCT CTACCTGTCA CTGGCCCCAG
  AAGACCCACA CTCGTCTCTA TTTGTTTACT TATCTATCTG TACAGTCCAC AACTTTTTAC
  TAAGAATCCT ATGTACCAAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	AKR/J	CAST/EiJ	NOD/ShiLtJ	WSB/EiJ
ss61376673	NES16749548	PERLEGEN	MM_PANEL2	f	SNP	T	C	T	C
SNP Consensus Information
SNP					Consensus Type	AKR/J	CAST/EiJ	NOD/ShiLtJ	WSB/EiJ
rs48183723					SNP	T	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61376673	NES16749548	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:34574301 () rs orientation: forward

Symbol	Name	Function Class
Kirrel3	kirre like nephrin family adhesion molecule 3	within coordinates
Rr208757	regulatory region 208757	389 bp proximal