rs48184771 SNP Detail

Summary

• ID
  rs48184771
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:89268491 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G TAGCCTTCCT TGCTTCTATT TTACCCTCTT GACTTGAAAA
  CTACGTCATC TCTAGTTTTC GTGGAGCGAT GCTTGGTAAC TGCTGGACAG GGGAGGATGA
  G
  AATGGTACGT GTCCCAGACA CACCCAGATG GTCACTCGAA TGACCCTCAT CCCAGGCTCT
  CGCGTTCAGC CTGAGAGCCC ACCAGAATAA CTACCCCTAC C                    
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss148330388	ENSMUSSNP5278798	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs48184771					SNP	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:89268491 () rs orientation: forward

Symbol	Name	Function Class
Gm62017	predicted gene, 62017	within coordinates
Klhdc7b	kelch domain containing 7B	629 bp upstream
Tssr4689	transcription start site region 4689	572 bp upstream
Tssr132668	transcription start site region 132668	587 bp upstream
Tssr132669	transcription start site region 132669	600 bp upstream
Tssr132670	transcription start site region 132670	614 bp upstream