rs48187347 SNP Detail

Summary

• ID
  rs48187347
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:120756865 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCCTTGATC TTGGTCAAGG
  ACGCCCTTGT ACTGTTGGAA CACTGGCAGA AGGCTTTAGC CATGTCAGAG CACTTATAAT
  AGGAAAATAC TGAAAGAGAG CACGTGGATC CATAATCTAG ACTAGCGCGG TAATGGAACT
  TGGGAATGAA AAATTAATGT ATGGGTAGAG AACACTAGAC TCCAGGAGGA GAGTTTCCTT
  R
  AAACTCTTTT GCCTCACGAG TGACTTTTAA GCCTTTCGGC TTGTCCAGTT GACTCAACTG
  GAGAGCGTAG CACATGGGAA ATGTAAATGA GGAAAATACC TAATAAAAAA GGAAAAAAGG
  AAAAAAAAAT AGAGATTTCA ACTGGCCTTG ATGAAAACAG TATGATAATA CCTGAAGTTA
  TTAGAAATAG GATTTCTGCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss134396210	ENSMUSSNP279561	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs48187347					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:120756865 () rs orientation: forward

Symbol	Name	Function Class
Rr395603	regulatory region 395603	within coordinates