rs48194898 SNP Detail

Summary

• ID
  rs48194898
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:55166764 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GATTGTTCAG TACTTAACAA
  TCCCATTCAA AATAATTAGT GTGCTGGAGA GGTGGGTCAG TGGTTAGGAA GAGCACATAC
  TGTTGTTCTT CCTAAGGACC TGAGTTCAGT TCCCAGCATC TACATTAGGT GACTTACCTG
  TAACCCCGGC TCCAGGTGGA TCTCTCTGTG GGCACTTGAG TCCATGTACA CAGCCCCCCC
  M
  CACACACACC CAATACACGT AATTAAAATA ATAAAAATAA ATCTTTAAAA AATAATTTGT
  ATCCAGGGCC ATTATCACCT ACAAATCAGA ATGTGGGAGT GCTATTCTAG AGGTCTCCAT
  CTTTGCCATT GCTGGGTCGC TCAGAAAAGC GTGATGGGGT TGTCCCATTG CCAAGAACAG
  CTTCTGCTTA CCAGCAGGTA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J	LG/J	SM/J
ss139573259	ENSMUSSNP2908685	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
ss324640907	CHEV_14_55548144	CHEVERUD	SCREENING_POP	f	SNP		A	A
SNP Consensus Information
SNP					Consensus Type	DBA/2J	LG/J	SM/J
rs48194898					SNP	C	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:55166764 () rs orientation: forward

Symbol	Name	Function Class
Rr389680	regulatory region 389680	within coordinates
Rr492369	regulatory region 492369	1213 bp proximal