rs48202910 SNP Detail

Summary

• ID
  rs48202910
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:60870629 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGTTGCCTC CCAAGCAACT
  GCGGGACCTC TGGCTGAGAG CCAAGGGATT TCTTCTTGGG TGGAAGGGAG AGGCAGGAAA
  AGAGCCCTTC TGCTGCAGGG ACCTGGTAGA TCAATCTGAA CAAAAAGTGT CTACCTCTCC
  CTCCACCTCC CACATTTTCT TCCTCTCCCT CCCTTCTCCA TCCAGTGAAG GATGGAACCA
  Y
  ACCAGGACAG GAGTGAATGT CTCAGCACCA GCTATAATAC AGGTCAGATA CAGGCAAGTA
  GCTCACACAC ACGCACATAT CCACCCACCA TGCACGCCCT CTAACTACAG CAATAGTTCT
  CAACCTGTGG GTTGTGACCC CCCTTTGGGG TCTAGTGACC ATTCCACAGA GGTCACCTAC
  GACCACTGGA AAATATAGAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss52344278	NES15283554	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	T	C	C	C	T	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs48202910					SNP	C	C	C	C	C	C	T	C	C	C	T	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52344278	NES15283554	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:60870629 () rs orientation: forward

Symbol	Name	Function Class
Gm20610	predicted gene 20610	within coordinates
Gm20611	predicted gene 20611	within coordinates
Rr219922	regulatory region 219922	229 bp distal