rs48214122 SNP Detail

Summary

• ID
  rs48214122
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:23293404 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGAGC AAAGCTAAGA AAGAACATGC
  G
  TTCATGTGTA ACGGGTGGCT CTCTC                                      
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss148843662	ENSMUSSNP4461875	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
ss322527925	CHEV_8_23913860	CHEVERUD	SCREENING_POP	f	SNP			G	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs48214122					SNP	G	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:23293404 () rs orientation: forward

Symbol	Name	Function Class
Ap3m2	adaptor-related protein complex 3, mu 2 subunit	within coordinates
Cpgi20156	CpG island 20156	1919 bp proximal
D8Dcr5	DNA Segment, Chr 8, Derry C. Roopenian 5	1274 bp distal
Rr381798	regulatory region 381798	within coordinates
Tssr80611	transcription start site region 80611	495 bp downstream