rs48231834 SNP Detail

Summary

• ID
  rs48231834
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:78807462 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGCTAAATA TGTAAATCAT
  GTAATTATGA GTATATGAAA ATTTGCAATT TTTGTCTTTT GCATATTGTA TTCTTTATCT
  TCTCTTTTTC ACTCTCCCAT TTTCTGTGTG TGTGTGTGTG TGTGTGTGTG TGTTTCTGTA
  TGCATTTGGG CTCACATATG TCTAGGTGCA TATACACATG AGTGTATGTT CATTTAGATG
  M
  CTGAAGCTGA TGGTAGTAAT CAGGCTTATA TTTTCTTTCA ACTTGCTCAC TGTCAGTCAA
  ACCCAGAGCT CTGTAGCCAG TATGCCATGG AGACTCCACC TTCTACTTCC GAGAATAAAA
  TTAGAAGCAA GCCACAATGT CCACATGAGA TTGTTTGGGT TCTGGCAATC CAAATTCAAG
  TTCTTATATT TGTAGGAAAG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss52379837	NES15267278	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	C	A	A	A	C	A	A	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs48231834					SNP	A	A	A	A	A	A	C	A	A	A	C	A	A	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52379837	NES15267278	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:78807462 () rs orientation: forward

Symbol	Name	Function Class
Gm47343	predicted gene, 47343	416 bp downstream
Or7a37	olfactory receptor family 7 subfamily A member 37	1016 bp downstream