rs48236768 SNP Detail

Summary

• ID
  rs48236768
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:20706451 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAAAGTACC TGGGAAATAA
  ACCCATTTCT ATTGACAGAG TCTGAAGTAC AGAATCTGAA TGGTGTTTAC ACTGCTCCTT
  ACACCGATTG CTTTGGACAA ATGAAGTGGG GTTTTAAATG TCCATTTAAG CTCTTCTGTG
  TCAACAGAAG CAGCAATTAA CTGTTGGAAT TCAAACATCT TTGTTTAGAA AGTAGTATTT
  K
  ATGAGACTTC AAAGAACACT TAGTACTTAC TGAACACTTT CCTTGTAAGC ACTTTGTAGC
  CATCTTGCAT TTACTGCTAA TAATCCTCTA GTGGGTCTGC TACCCACCTG TGACAGATTA
  CACTGCAGCT TAGGACGGTC AACCTGGCTA AGGCCATGCA GACAGGAAAT ATAAAATCTG
  AGGTTAAAGA CACATTTTCT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	CAST/EiJ	KK/HlJ	MOLF/EiJ
ss52173853	NES15231475	PERLEGEN	MM_PANEL2	f	SNP	G	T	G	T
SNP Consensus Information
SNP					Consensus Type	A/J	CAST/EiJ	KK/HlJ	MOLF/EiJ
rs48236768					SNP	G	T	G	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52173853	NES15231475	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:20706451 () rs orientation: forward

Symbol	Name	Function Class
Gm33510	predicted gene, 33510	within coordinates
Gm48651	predicted gene, 48651	within coordinates