rs48240277 SNP Detail

Summary

• ID
  rs48240277
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:12827880 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAGGG AGTGGCACTA TTTGGAGGTG
  K
  GGCCTTGTTG GAGTAGGTGT GTCAC                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147089634	ENSMUSSNP1111663	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs48240277					SNP	G	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:12827880 () rs orientation: forward

Symbol	Name	Function Class
D15Mit199	DNA segment, Chr 15, Massachusetts Institute of Technology 199	1054 bp distal
Drosha	drosha, ribonuclease type III	within coordinates
Gm62094	predicted gene, 62094	1230 bp downstream
Rr306236	regulatory region 306236	1521 bp proximal
Rr311575	regulatory region 311575	1279 bp distal