rs48241667 SNP Detail

Summary

• ID
  rs48241667
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:10157837 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTCCTGACA CCTTCTGTGG
  CTGTCGCCAC CAGCTTGGAA TGATTATGGG GAATTTCCAT CCTGCAGTGA TCCATCTGGA
  AGCAACAGGC AGTTGTGTAC ACACTCAGTC ATGCTCTCCC TGACAGGCGA CTTCCCCTGC
  CCCAGTGCAG CCTGAGGAAG AATGAATAAG CTAACAACGT AAGGGGAAGG GAGCCAGAGA
  M
  GCTTCCTCTT CGTTATTCTG AGACTGGCCG GATTGTCTAC CTGTCAGATG GTTCATCCGT
  TCCACTCACC CCTCTCATGT CCCTCTCAGG TTCTCAGGCC AATGTCTCTA GGGAGACATT
  GGAGAGGGAG GGGTGTGTGT GTATGTGAGA GAGAAAGATT CTATATGTGT TCATATGCTT
  GTTTACATTC CATGTCTGTG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ
ss60369566	NES15864745	PERLEGEN	MM_PANEL2	f	SNP	A	C	A
SNP Consensus Information
SNP					Consensus Type	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ
rs48241667					SNP	A	C	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60369566	NES15864745	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:10157837 () rs orientation: forward

Symbol	Name	Function Class
Myef2l	myelin expression factor 2 like	215 bp downstream
Rr573569	regulatory region 573569	within coordinates