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rs48247386 SNP Detail
Summary
  • ID
    rs48247386
  • Variation Type
    SNP
  • Alleles
    A/G
Genome Location and Flanking Sequence
  • Location
    Chr12:12583256 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                          CTTCC TCTCCCAGCA GCTTTCCATT
    R
    CTAATCTCCT CAGCAGTGGG TAGGA                                      
    
    R = A/G
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
129X1/SvJ
A/J
DBA/2J
ss137142578 ENSMUSSNP1569737 ENSEMBL ENSEMBL_Sanger f SNP G A G
SNP Consensus Information
SNP Consensus Type
129X1/SvJ
A/J
DBA/2J
rs48247386 SNP G A G
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr12:12583256 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Rr266588 regulatory region 266588 1457 bp distal
Rr266589 regulatory region 266589 1346 bp proximal
Rr386869 regulatory region 386869 1631 bp downstream

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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last database update
12/17/2024
MGI 6.24
The Jackson Laboratory