rs48251353 SNP Detail

Summary

• ID
  rs48251353
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:84210005 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCTGGCTTC TGTCAGATTA
  GCTGGGCAAG ATGTGACAGG CCTCTGTCCT CTGGGGAAAT CGCTCCTTTC CTGGGAGGTG
  GTGAGGACAT TCCCAGGTTG CTCTGTTCCT GCCCTCTCCC TGCACCCTCC CAGTCTTACC
  GCTTTACCAT TGGGGAAAAA AAATCAGACA GATTTCTTGT TGTTTTTGAA AATACATATT
  Y
  ATTCTACAAA GGCTGAGGGA AGCCTGCTAG CTACAAGGTA GAGGTTTTGC CAGGTTGGGG
  ACTCTTGGAG ACACAGCTCT TTCTGCCTGT GAAGAGTTTA CAGTCATGCG TGTGGGCAGG
  ATGTGTGTAT CAGGCAATGT GGTTGCATAT AGCAAATTTT TGTGGTTAGC AAGGAGGGGA
  GAACCTAGTT TAGCCTAAAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss146124335	ENSMUSSNP2951876	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs48251353					SNP	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:84210005 () rs orientation: forward

Symbol	Name	Function Class
Rr405491	regulatory region 405491	916 bp upstream