rs48266448 SNP Detail

Summary

• ID
  rs48266448
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:143568073 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATAGCTGAA TAGCTGAAGC
  TCTGTGAGTA TTTATTCTTG TCTCCAGCCA TGACTCCTGG GATGTCTGTG ATCCGCTTCT
  AATTTGCATT ATTCTGTCTT CAAAGATGTG TCTTGAAAAA AAATGTTAAG TAATTTTTTA
  GCCTTAGTTT CTTTCACCTA CCTTTTATCC TCATGGTAAG ATTCAGGAAA TGTGTTTTTT
  K
  TTTTTTTTTT TTACTCAACA CCCACATGTT TTCTCAAATG TACAGAAATA GCCTAGGCAC
  TGAGGCCCAA TACATAATTC ACTCCCAGTA CACATGTCCT AGGAAATGGA GAGCTGGATG
  GCAGAGATAT ACATCATATA TCCAAAGATA ACTTCATCAC GGTCTCTGGC TTGTTAAAAT
  AGGAGGAAAC CATTGCCTTT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss136026688	ENSMUSSNP364746	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs48266448					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:143568073 () rs orientation: forward

Symbol	Name	Function Class
Gm33925	predicted gene, 33925	within coordinates
Gm40160	predicted gene, 40160	within coordinates
Rr79606	regulatory region 79606	within coordinates