rs48266733 SNP Detail

Summary

• ID
  rs48266733
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr14:68842542 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GCTTTGGACA ACAAGGAAAA TTTATTGATT GTACAAGAAG
  TCCCAGCAAA ACGTGGACCT AGTTCAACAA TTGTTCATCT ACCAGTTCAT AACATCTTAG
  R
  AAGTGCACTT GGAGTTTGTT TATCTCCCTG CTCTATCTTG TTCACATCAT TCTTGTCTCC
  AGATCACAGC ACAGCTGCAG CAATACCAGA TGTCAACAA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss62443517	NES17255010	PERLEGEN	MM_PANEL2	f	SNP	A	A	G	G		A	A	A	G
ss139661433	ENSMUSSNP4502204	ENSEMBL	ENSEMBL_Sanger	f	SNP	A				G
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs48266733					SNP	A	A	G	G	G	A	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss62443517	NES17255010	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:68842542 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Adam28	a disintegrin and metallopeptidase domain 28			mRNA-UTR
				Noncoding-Transcript-Variant
Tssr129435	transcription start site region 129435			1377 bp downstream