rs48267751 SNP Detail

Summary

• ID
  rs48267751
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:113394654 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTGTG TTTCCTGTGT CCAGGGTGGA
  Y
  CTATCTCCTC CGTGGTCACT GCCAG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	LG/J	SM/J
ss138742457	ENSMUSSNP7071278	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
ss324175507	CHEV_12_114669245	CHEVERUD	SCREENING_POP	f	SNP		C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	LG/J	SM/J
rs48267751					SNP	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:113394654 () rs orientation: forward

Symbol	Name	Function Class
Igh	immunoglobulin heavy chain complex	within coordinates
Ighd4-1	immunoglobulin heavy diversity 4-1	496 bp upstream
Ighg	Immunoglobulin heavy chain (gamma polypeptide)	within coordinates
Ighj1	immunoglobulin heavy joining 1	1201 bp upstream
Ighj2	immunoglobulin heavy joining 2	1519 bp upstream
Ighj3	immunoglobulin heavy joining 3	1902 bp upstream
Tssr115504	transcription start site region 115504	794 bp downstream
Tssr118012	transcription start site region 118012	1901 bp upstream
Tssr118013	transcription start site region 118013	1886 bp upstream
Tssr118014	transcription start site region 118014	1782 bp upstream
Tssr118015	transcription start site region 118015	1686 bp upstream
Tssr118016	transcription start site region 118016	1532 bp upstream
Tssr118017	transcription start site region 118017	1192 bp upstream
Tssr118018	transcription start site region 118018	649 bp upstream
Tssr118019	transcription start site region 118019	593 bp upstream
Tssr118020	transcription start site region 118020	548 bp upstream
Tssr118021	transcription start site region 118021	431 bp upstream
Tssr118022	transcription start site region 118022	402 bp upstream
Tssr118023	transcription start site region 118023	239 bp upstream