rs48272907 SNP Detail

Summary

• ID
  rs48272907
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:84210838 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTTGCATCGA TTAGACAAGT CCTTTAGATT GATCATTTTC
  TCGAGTTTAC TGTGCATAAA GATCACTTGG GACATTCAGT TAAGTGTGGC TGTTTGGTGT
  T
  TGTCATGTGG ACTCGGGTCC TACATGGCTC AGCAATGTGC ATTTTTAACA AGCTACGTGG
  ATCAGAGAGC ACATTTTGAA AGAAACAGTC CTAGAAGCT                       
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss146124377	ENSMUSSNP1310088	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs48272907					SNP	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:84210838 () rs orientation: forward

Symbol	Name	Function Class
Rr405491	regulatory region 405491	83 bp upstream