rs48276182 SNP Detail

Summary

• ID
  rs48276182
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:141151279 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACCCA ACATCGGTGA CCTCGGCCCT
  W
  CGAGAGGATG GTAGCCTCAC CATCC                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss147736134	ENSMUSSNP2280543	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs48276182					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:141151279 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15228	CpG island 15228	1868 bp proximal
Gm70191	predicted gene, 70191	378 bp downstream
Hspb7	heat shock protein family, member 7 (cardiovascular)	within coordinates
Rr603759	regulatory region 603759	857 bp proximal
Rr603760	regulatory region 603760	1335 bp proximal
Tssr40062	transcription start site region 40062	1445 bp downstream
Tssr40063	transcription start site region 40063	28 bp upstream
Tssr40064	transcription start site region 40064	88 bp upstream
Tssr40065	transcription start site region 40065	103 bp upstream
Tssr40066	transcription start site region 40066	232 bp upstream
Tssr40067	transcription start site region 40067	280 bp upstream
Tssr40068	transcription start site region 40068	332 bp upstream
Tssr40069	transcription start site region 40069	464 bp upstream
Tssr40070	transcription start site region 40070	549 bp upstream
Tssr40071	transcription start site region 40071	573 bp upstream
Tssr40072	transcription start site region 40072	618 bp upstream
Tssr40073	transcription start site region 40073	641 bp upstream
Tssr40074	transcription start site region 40074	666 bp upstream
Tssr40075	transcription start site region 40075	679 bp upstream
Tssr40076	transcription start site region 40076	706 bp upstream
Tssr40077	transcription start site region 40077	725 bp upstream
Tssr44314	transcription start site region 44314	1329 bp upstream
Tssr44315	transcription start site region 44315	66 bp downstream
Tssr44316	transcription start site region 44316	149 bp downstream
Tssr44317	transcription start site region 44317	207 bp downstream
Tssr44318	transcription start site region 44318	590 bp downstream
Tssr44319	transcription start site region 44319	1600 bp downstream