rs48276761 SNP Detail

Summary

• ID
  rs48276761
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:53223878 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTACTAAAA GTCATAGAAA
  TGAGTACAGT CCCATGTTTA CTAACATTCA TAGCAACTAG AAATAAAACC AGCCTAGAGA
  TCCATCCACC TGTAAGCATG TAAGAAAATG TGGTACATAT ACACGATGCA ACTTTATTTG
  GCCATAAAGG AAAATTAAAT TGTGACTTCT GCAGAAAACC AAATGGGACT TGAAATCACT
  M
  CATTAATCAA AGCATGCCAG ACCCGGGAAG GCAAATGCGT CATGTTTTCT CTCATATTGT
  TAATCTAGAT TTGAAATCTT GTTCATGTGA ATTCTTGTTC TACTTGTGAA ACTAGAAAGA
  GCTAAGCTAG AGAAGAATAA AGAGGGAGGC AGAGTATAGA GAGGGTGTGT AAGGAGGGGG
  ACAGAGCAAA GGGCTCTTGT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss147113495	ENSMUSSNP681798	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs48276761					SNP	A	A	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:53223878 () rs orientation: forward

Symbol	Name	Function Class
Cep85l	centrosomal protein 85-like	within coordinates
Pln	phospholamban	1783 bp downstream
Tssr97581	transcription start site region 97581	727 bp downstream
Tssr97582	transcription start site region 97582	847 bp downstream
Tssr97583	transcription start site region 97583	1999 bp downstream