rs48281115 SNP Detail

Summary

• ID
  rs48281115
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:122271862 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACAAG AAATCAAATT CTGCCTTTCG
  Y
  TATTTATCAT ATTAATCTGT TGACA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss147419483	ENSMUSSNP2352402	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	C
ss320488795	CHEV_2_122267117	CHEVERUD	SCREENING_POP	f	SNP				T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs48281115					SNP	C	C	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:122271862 () rs orientation: forward

Symbol	Name	Function Class
Rr563981	regulatory region 563981	608 bp distal
Slc28a2	solute carrier family 28 (sodium-coupled nucleoside transporter), member 2	Intron