rs48281777 SNP Detail

Summary

• ID
  rs48281777
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:191031187 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTTGT ATCAAACCCC CAAACAACTC
  K
  ATATCATGCT GTTCTTTATG GTGAT                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss146503827	ENSMUSSNP4774318	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs48281777					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:191031187 () rs orientation: forward

Symbol	Name	Function Class
Gm70230	predicted gene, 70230	450 bp upstream
Rr426104	regulatory region 426104	1788 bp distal
Rr426105	regulatory region 426105	185 bp proximal
Rr426106	regulatory region 426106	462 bp proximal
Rr426107	regulatory region 426107	736 bp proximal
Tssr10766	transcription start site region 10766	559 bp upstream