rs48287216 SNP Detail

Summary

• ID
  rs48287216
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:53019597 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGAATGGGG GGGCAGACTT
  GATGGACACA TACATACTAT ATCTACATAT ATATATATAT ATATATATAT ATACACACAC
  ACATTCCCGA ACATCTCAAA CAACAATAAA ATGAATACAA TTTACAACAA AGCAGAGGCT
  GGCTAGGTAG CTGAGGCTGG CCTAGCACTC CCTGTGTGTG CCGGCTGAGT TCCAAGATTA
  C
  AGATGTATAT ATATATCACC CTGGCTTTGG GAAGCACACG CTTCTCAAAC CAATTCTATT
  CTTTCAAAGG TCCTTGAGCA ATGACAATTG ACTTTGGTTA GCACGAGGAA AAGAGGACTC
  GTGGAAGGTC CTCAGGACCG AGGAGGGAGC TTCTGAAGTG ACAGAGGTCA TGGGAGGCCC
  AGAGTACCCC GTAGACCTCT                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss149005022	ENSMUSSNP1715337	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs48287216					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:53019597 () rs orientation: forward

Symbol	Name	Function Class
Auh	AU RNA binding protein/enoyl-coenzyme A hydratase	within coordinates
Rr284124	regulatory region 284124	5 bp proximal