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rs48292234 SNP Detail
Summary
  • ID
    rs48292234
  • Variation Type
    SNP
  • Alleles
    A/G
Genome Location and Flanking Sequence
  • Location
    Chr3:121708501 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                                AGGGTGGACC CAGCCTTTCC
    CAACGTTTAT TCTGAGAGCT CCAGTTCGCA CAGTGGGACG TGCTCCAGAC ATGGGAATAC
    AGCAGCGGGG CCAACCGGGA AAACCAAAAA TATAAACGGA GAGATTTGCT AGATTTCTGT
    TCTCCCTTCC CAAATTGTGC CAGGAATGTG TGCTAGAGCT GCTTCTACTG TTCTTGGTGG
    R
    ACTCGGCCCT TCCTGGGAGG AGGGCTTCTG GAGTTTATAG GACTTGCCGG TTTGCACAAA
    AGAAAGTTAG CCTGGCTTAG GATCTCCGGG CCTTGTGCTT GATCCAGCAC AAGAATGCAA
    TAAATGTTGA GAAACAATAG CTAAAGAGCC TTGCATCTCC AACACTGGCA ATGAGTTTAA
    CAAGTCCCCA TCCCCCGTCC                                            
    
    R = A/G
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
129X1/SvJ
A/J
DBA/2J
ss135731719 ENSMUSSNP6395307 ENSEMBL ENSEMBL_Sanger f SNP G A A
SNP Consensus Information
SNP Consensus Type
129X1/SvJ
A/J
DBA/2J
rs48292234 SNP G A A
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr3:121708501 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Gm34119 predicted gene, 34119 within coordinates
Rr584204 regulatory region 584204 within coordinates
Rr584205 regulatory region 584205 1981 bp proximal

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory