rs48300499 SNP Detail

Summary

• ID
  rs48300499
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:105214467 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAAGAGAAAA AGAGGTTCAA
  CTGCTCTCCT AGCTTGCAAC ACCAGTGCAT GAACTCTGCA TTTTCCCAGC CAAATCCTCA
  CCCCCACTTC TCCCCTGCCT CTTTCTAAGC TTGTCCACTT ATGTACTGTA AAGCACCTAT
  CTCCACGTGC CCATGCCTGC CCGAGAGCCT GTGCCTCTTC TCAGGTCACC TCACCTTAAC
  G
  AGCAAAGCTG AGCTGGGCCT TGTGAGGCTG CGGTACTCAC CTTGGAAAGG GACATCCACG
  AGTTTAGAGT GGTCTAGGGA GAGTCCATTG ACCAAGCAGC GAGCATTGCG CCGTTCAGAC
  ATGATCTGAG GAAGGAATGG GGGGGGAGTG TGCTCTGTTA GAACTACATT GGCCCTGAAG
  CCCCCACCTC ACTACCCACC                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss145608122	ENSMUSSNP4203091	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs48300499					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:105214467 () rs orientation: forward

Symbol	Name	Function Class
Apbb1	amyloid beta precursor protein binding family B member 1	within coordinates
Tssr74041	transcription start site region 74041	215 bp downstream
Tssr74042	transcription start site region 74042	240 bp downstream
Tssr74043	transcription start site region 74043	311 bp downstream