rs48301331 SNP Detail

Summary

• ID
  rs48301331
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:47691255 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAAATTCTG TGGGGTGTAG
  TGACTTGTAT CTGAACCATG TGGCCACAAA CATATTATCA GTATGTCTGT GTGTTAACCT
  ATTCTTTGGT CTAGAATGCC ATTCTGCATT CTTTGAGATC ACCATGTTTA GTGAAATAAG
  CCTGCTCAAA GATATAGTAT GGTAGGGTAT CAGTCCTCAG CTTGTCACTA TTGAGAGGTT
  K
  TGGAGCTTTT ATGAGGTGGG CTCAGGAGAA GGTTATTAGA GGTATGTCCT GATGAGAGCT
  GTCGATTCTC ATCTTGACTT CTTTCTTTGG CTTTCTGACC ACAAGATGCA CAGTCTTGGT
  TTGATACATT CCCTTCCTGT GATACTGATG TCAACAGAAA GCTTGTTGCT CAGCATTCAC
  AGAAGCTGTA TGGCTATAAT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss61788741	NES17713104	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	G	T	T	T	G	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs48301331					SNP	T	T	T	T	T	G	T	T	T	G	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61788741	NES17713104	PERLEGEN	MM_PANEL	f	SNP	G/T