rs48306557 SNP Detail

Summary

• ID
  rs48306557
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:148527060 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGTTC CTGTCCCCTG GAGTTCTATT
  T
  CCAGACATCC ACATGACCAG TTCCA                                      
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss148007630	ENSMUSSNP4635697	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
ss321420454	CHEV_4_147816712	CHEVERUD	SCREENING_POP	f	SNP			T	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs48306557					SNP	T	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:148527060 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15303	CpG island 15303	1575 bp proximal
Gm23303	predicted gene, 23303	749 bp downstream
Tssr44605	transcription start site region 44605	1852 bp downstream
Ubiad1	UbiA prenyltransferase domain containing 1	within coordinates