rs48315207 SNP Detail

Summary

• ID
  rs48315207
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:145290194 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A GCAGTAAATA ATACTGTGCC TTGACCTAAA ATCATGTTAA
  TTTTCTCCAA GACTTATAAT TTGTCTCCCA CAGGTTCTCT CTGTATTATT TTTATTTGCC
  T
  TACTGCATTT TATTTGTTGT TGTTGTGTTT TTTTTTTTTT TTTTTTTTTT TTTTTTGGTT
  TTTTGAGACA GGGTTTCTCT GTATAGCCCT GGCTTTTGGG A                    
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ
ss147866178	ENSMUSSNP6588868	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ
rs48315207					SNP	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:145290194 () rs orientation: forward

Symbol	Name	Function Class
Gm70447	predicted gene, 70447	981 bp upstream
Rr97125	regulatory region 97125	835 bp proximal
Tssr40222	transcription start site region 40222	990 bp upstream