rs48315465 SNP Detail

Summary

• ID
  rs48315465
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:93224442 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTACCCCACC TTCTGCTTCC
  TGCCTCAGCA CACCGGCCAT AGGCTCTTTT ATTGACAGGT GTTGCTATGT GATAGTCTCT
  CTACAGAAAA CAGCTGGTTG CATCACTGTT GGTACATCCA TAGTGAAGAG TAAAGAGAGA
  TACATGCATG CTTGCTTACT GCTTCTTGAT TGGTGCTTGT CTTCATCAGG GTTTCTATTC
  S
  TGCACAAACA TCATGACCAA GAAGCAAGTT GGGGAGGAAA GGATTTATTC GGCTTATACT
  TCCATACTGC TGTTCATCAC CAAAGGAAGT CAGGACTGGA ACTCAAGCAG GTCAGGGAGC
  AGGAGCTGAT GCAGAGGCCA TGGAGGGATG TTCTTTACTG GCTTGCTTGC CCTGGCTTGC
  TCAGCCTGCT CTCTCATAGA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss148843921	ENSMUSSNP1440263	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	C	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs48315465					SNP	C	C	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:93224442 () rs orientation: forward

Symbol	Name	Function Class
Gm71590	predicted gene, 71590	591 bp downstream