rs48319467 SNP Detail

Summary

• ID
  rs48319467
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:57587220 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCATTAATAT GGAATAATTG
  GGACAGATTA GTCAAAAATG CTTTCATCTT TCTTTCTTGC CAACATTGCA TTTTAAAATA
  ATTAAAACTC CAGATTGTTT CTGGTTTTCA CCTAAGTTTA CTGGCACCCA ACAAAGCAGC
  CTACACTTTG ATTTTAATCA TGGCCAGACA GTATAAGACC CTTGTCTCAC AGGCAGCGAG
  W
  GCAGCAAGTA GACACCCTGC TGGGTAATTT CAAAGCAATG TACTTCCTGC TGTTAGCCCT
  ACAGTATGAT TTCTGTTCTG CCAAGGGCAC CAAGAGAAGG CAACTTCCAA TTTGCACCTC
  ACACATAAAT TCATCTTGTG CCAATAGGCT CAGAAGAAAA CCACAAGCTA CCTAGCCCAG
  CCATCAGGGG TCTGTTAACA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss144926270	ENSMUSSNP6436759	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs48319467					SNP	A	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:57587220 () rs orientation: forward

Symbol	Name	Function Class
Rr814	regulatory region 814	within coordinates