rs48325752 SNP Detail

Summary

• ID
  rs48325752
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:84414614 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATTCTTCTCG GCCATGGTTG TCACATTACT AAAAGCAAGT
  CACATGCTCA TGGAGGAAAA GAACTATACA AGGCATTTGT ATCAAAGAGT GGGGCTCGCT
  R
  GGGCCCCTAG ACAGCTCTCT ACCCCAAGAC ACAGGGGACT CTGTCCTTCT TCCTGTTCCC
  CGAGGATCCT GAGTGCTACT AAGTGTCAGT ATCACTCAT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	MSM/Ms
ss146130467	ENSMUSSNP171334	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	MSM/Ms
rs48325752					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:84414614 () rs orientation: forward

Symbol	Name	Function Class
Tssr146028	transcription start site region 146028	996 bp upstream
Tssr149629	transcription start site region 149629	760 bp upstream