rs48330172 SNP Detail

Summary

• ID
  rs48330172
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:115665473 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G ACAAGTCATA GTCAGTAGAT GCATTGTTCT TGATCTGTTT
  GCCATCCTTG ATGAGGTAGC CTTGACCAAT CTTGTAAATC TTATTGTTAA TCTCTGTTCG
  S
  TGATGGTAGC CTTTCTGCCC AGCTCGAGCC ACAGAGAAGG CGATACGGGC ATGGTGCCAG
  GCTCCAATAC AGGCAACTTT GCGCAAACCT CGATGGGTCT T                    
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss145345343	ENSMUSSNP1363446	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs48330172					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:115665473 () rs orientation: forward

Symbol	Name	Function Class
Gm6035	predicted gene 6035	within coordinates
Tssr124162	transcription start site region 124162	856 bp downstream