rs48333549 SNP Detail

Summary

• ID
  rs48333549
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:123600824 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATTTTAATA AATACTATAA
  AATATCTGTT CTTATAGTTT GTGGTGGTTT GAATAAGAAT GGCCCTTGTA GGCTCATATA
  TTTTAATGCT TAGTCTTCAG GGAGTGGCAC TAGTTGAGAG GGATCAGGAG GTGTGGCCAT
  ACTGGAGGAA ATCTGTCACT GGGGGTGGGC TTTGAGGTTT TGGAAACTCA AGTCAGGCCC
  M
  GTGTCTTACC CTTCCTCCTG CCTGTAGATC CAGATGTAGA ACTCGGCTAC TTCTTTAGCA
  CCATTTCTTC CTGTCTGTTG CCATTCTTTC CAGCAGGATG AGAAGGACTA AACCTCTTAA
  CCTATAAGCC ATCCCCAAAT AAATGTTTTC TTTTATGAGC TGCCATTGTT ATTATGTCTC
  TTCACAGCAA CAGTATACTG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

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SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss135773710	ENSMUSSNP5296525	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C
ss320923135	CHEV_3_123510093	CHEVERUD	SCREENING_POP	f	SNP			C	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs48333549					SNP	A	C	C	A