rs48341494 SNP Detail

Summary

• ID
  rs48341494
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:95159348 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T TCCGCTAGTT CTAACATTCA CAGCTGTCTA CAGCCAAAGC
  TTGGTAGCAT TAAAATCATA GGGCGATGAG TGGCAAAATG TTAGACGTGA GGAAGCCAAG
  M
  CCGGGGTAGG AAAGCCCTCT CTCCAGTGCC CATCACCATC ACTGAACAGC CTTAAAAGCA
  GAGGCCAGAG GAGGAGAGTG AGGAGGGCTG AGCGGGTGAC C                    
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss144969083	ENSMUSSNP5543572	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs48341494					SNP	A	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:95159348 () rs orientation: forward

Symbol	Name	Function Class
Gm48420	predicted gene, 48420	1461 bp upstream
Pde8b	phosphodiesterase 8B	1614 bp downstream
Tssr120710	transcription start site region 120710	977 bp downstream
Wdr41	WD repeat domain 41	within coordinates