rs48364419 SNP Detail

Summary

• ID
  rs48364419
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:37740612 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCCCATTTCA TACCTAAACA
  GATTTGTCTC AAAGTGCCCA CCCCCAAGGT CTGGAGATTG GCTGCCTTCT GAGTCTGTGA
  TAGAGAGAAA ATCGACAAAC AGCTCAGGAA TGAAAACACT GTCCCTGAGA ACAACTAGAA
  GAGAGGATGC GATTGTTTAT CCCCCTAATA TAAAAATGTC TGTAGTGGGG AGGAACAGCC
  R
  GAAGTTCAAC AGTGCGAGAA AGATCACTGG GAGAAGGAAC GTTAGCGGAC CCCTTGACTT
  ACCCGGTGTA ATTCTGCTGG GTGTTTTGAG CAGTCAATTA GCCAATGTTT GCTCACCCAC
  TCAATCTCTT TCTGATTCTT TCCCTTCCTC CCTCCCTCTC TCTCCCTCCC TCTTTTCTTT
  TGACTTGTAT ACTTAAAAAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss134811080	ENSMUSSNP3188383	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs48364419					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:37740612 () rs orientation: forward

Symbol	Name	Function Class
Gm65174	predicted gene, 65174	569 bp downstream
Rr575540	regulatory region 575540	316 bp proximal
Rr575541	regulatory region 575541	687 bp proximal
Rr575542	regulatory region 575542	789 bp proximal
Rr575543	regulatory region 575543	1269 bp proximal