rs48370185 SNP Detail

Summary

• ID
  rs48370185
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:67002319 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTCCTTGTA TCGCTATCCG
  ATGTCCCTTC TCGTTCAGTT GAGAAGGCAG CAGTCCTCAT GTCTACTAAG GTATTAACCA
  CAATGATGCC AATGGTCAAC TGCAAGGAAA GCTCTGGGGT GTTGGAATTC TTCTGTATCC
  TGTCTTGTGA TGGGTTTCAC GAGAGTCTAA AGGGAGGAGG AAATGAGAGA GAGCAATGGC
  R
  AGGGAGAATG ACAAATCTTG CATGGGTTCT CTTATGTAGA ATCCAGGTGT GTGTGTGTGT
  GTGTGTGTGT GTGTGTGTGT GTGTGTGTGT GTTTAACATG GTTGATATGG TATGGTAATG
  GTATGAAGTG GAATATCATG GAGTGGCATG GGAGGGGATA AAAGTAGAAG GGGGGGTAAT
  TGTAGGAGAA AAGACCAGCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss62440202	NES17246770	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs48370185					SNP	G	G	G	G	G	G	A	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss62440202	NES17246770	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:67002319 () rs orientation: forward

Symbol	Name	Function Class
Adra1a	adrenergic receptor, alpha 1a	within coordinates
Gm62844	predicted gene, 62844	within coordinates
Rr293226	regulatory region 293226	319 bp distal
Rr389792	regulatory region 389792	1139 bp downstream