rs48371580 SNP Detail

Summary

• ID
  rs48371580
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:118689064 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGGACTTGG CAGACGAATG
  TGGTCTGCAA CAGATGTTAA AAGGATTCTA TGACTTCAGT GTCTTTCTTC TTAAATGTAA
  GCATGCTCAG GACAAAAGCC CAGTAATTCT AATCCTAGAG AAAGGGGAAA ATAAATAGGG
  CATTAACTTT TGGGGACAAA GATCACAAAT GAGCCCATGT TATTTGTATG CTTATTTACT
  R
  AAAGTCTAGA TAAACTGCTT ATAATCAATT ACATAGTGTT CCTGCAAACA ACTGAAAACG
  TCAATTTTTA TTAAATGATC TAATTCATGG ACTTTGGTTT TATAAAGGAG ACTTCATTTC
  TACCAATGAA TAAATGAATA AATGGGTCTC GATATTTAAA GCTTCTCAAA TGTAGGAGGT
  AAGTAACCTG TTATAGAAAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	NZW/LacJ	PWD/PhJ	SM/J
ss61322048	NES16929552	PERLEGEN	MM_PANEL2	f	SNP		A	G
ss323503897	CHEV_10_118290215	CHEVERUD	SCREENING_POP	f	SNP	G			A
SNP Consensus Information
SNP					Consensus Type	LG/J	NZW/LacJ	PWD/PhJ	SM/J
rs48371580					SNP	G	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61322048	NES16929552	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:118689064 () rs orientation: forward

Symbol	Name	Function Class
Gm67702	predicted gene, 67702	within coordinates
Rr226050	regulatory region 226050	264 bp distal
Rr226051	regulatory region 226051	538 bp proximal