rs48373544 SNP Detail

Summary

• ID
  rs48373544
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:111860347 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCTGTCAAT ATTTATGCAA
  AATAAAAATC ATATTCAATG CATTTTAAAG TTTTCTTCAT AATTTTATAC CTCTACTCTT
  GATATCTTTG TCTTTGTTTG ATATTTGACT ACTAAAAGTT ATTTTTATTT AAGAATGTGT
  AATAGAGATG GTAAAGGATT GCGTTTCCGT GTTAAAGGAA ACCTATCCTG TCCAAACCTC
  W
  CCCACAAAGG CATTGCAAGT TTCTATCTTT CTGGGGTTTA CCTTTGTCTG ACCTTGGCTC
  CTTGCTTTCT GCTCTATTGG GGACAATGGC AGGTGAGAAG TCGGGTGATT GATATATGGG
  AAAAAGCAAA TGCAAACTGC CCACACTGGG ATTGTTCTTT GTCAACACAC ATAGTTGGCT
  GTAAATGCAG TATTTCCATT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	LG/J	SM/J
ss134277734	ENSMUSSNP3853215	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
ss325913351	CHEV_X_110064259	CHEVERUD	SCREENING_POP	f	SNP		T	A
SNP Consensus Information
SNP					Consensus Type	A/J	LG/J	SM/J
rs48373544					SNP	T	T	A