rs48377260 SNP Detail

Summary

• ID
  rs48377260
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:26486963 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGGCT GATCTGTAGT ATAAAATAAT
  T
  CCTCTACCTG AGCTTCCCAG TTATA                                      
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss145398343	ENSMUSSNP949739	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
SNP Consensus Information
SNP					Consensus Type	A/J
rs48377260					SNP	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:26486963 () rs orientation: forward

Symbol	Name	Function Class
Gm16580	predicted gene 16580	1348 bp upstream
Gm50013	predicted gene, 50013	within coordinates
Luc7l	Luc7-like	within coordinates
Rr329962	regulatory region 329962	838 bp proximal
Rr337090	regulatory region 337090	834 bp proximal