rs48383053 SNP Detail

Summary

• ID
  rs48383053
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:39766311 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TATTG TGGTTATTGT ATCTAAGGCT
  R
  TGAAATGAGC TCAGCAGAGA TTCTG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss134852994	ENSMUSSNP1175543	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	A
ss320726062	CHEV_3_39611084	CHEVERUD	SCREENING_POP	f	SNP				G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs48383053					SNP	A	A	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:39766311 () rs orientation: forward

Symbol	Name	Function Class
Gm46834	predicted gene, 46834	1068 bp upstream
Rr575767	regulatory region 575767	578 bp proximal
Rr575768	regulatory region 575768	1079 bp proximal
Rr575769	regulatory region 575769	1954 bp proximal