rs48383681 SNP Detail

Summary

• ID
  rs48383681
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:13210165 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGTAACCTG GTCCCTAGTA
  TGCCTGCATC CTGATCAAGC ATTAAAAACA CCTTCAAAGA ATGAAGTGGC TTCCAAATAA
  CAAAACTCCT AGCTGGAATT CAGCTTAACC GTCTGCAAGG GAAGATAGTA GAGTCCATGT
  TCTCAGGGAC ACAGTGTTCA GGGCTAGAGA TGGAGCTTGG TCCATAGGGT GCTTGCTAGG
  Y
  ATGCTGGAAG TCCTGGGGTC AATCCCCAGG CATTGCATAC ACTAGGTGTG GTAGTGCAGT
  TCTATCAGCC CAGAGAAAGA GAGAAGGAAG CAGGAAGATC AAAGTCCAAA CATCCTTGGC
  TACATAGGAA GTTTGAGAGT AGCCTGGACT ACATATGACC CTGCCTAATA AATTAATTAA
  TTTAATTAGA AACAGATGGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss146300279	ENSMUSSNP793015	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs48383681					SNP	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:13210165 () rs orientation: forward

Symbol	Name	Function Class
Rr551952	regulatory region 551952	1079 bp proximal
Rr551953	regulatory region 551953	1652 bp proximal
Rsu1	Ras suppressor protein 1	Intron