rs48386853 SNP Detail

Summary

• ID
  rs48386853
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:84091175 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGCTGCTAGG CTCTGAGTCT TTATCTGCGC CTCTCCAACT
  TTAATGTGTT CAGGTTTTGA TTTGGTACAT TCAGGTTGAG GCTCTTGGGG GTGCGTGGGG
  K
  GGACTTTCTA AGAAGTCTTC TGGTGATGGT GAAACTGTTA GTTCTAGGAC ATTTTAAGAA
  TCAGTGCTAT AATATCAAAG GTTGTTTCTT AAGAATCCA                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss134233983	ENSMUSSNP1319097	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
ss325902976	CHEV_X_82292908	CHEVERUD	SCREENING_POP	f	SNP			T	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs48386853					SNP	T	T	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:84091175 () rs orientation: forward

Symbol	Name	Function Class
Dmd	dystrophin, muscular dystrophy	within coordinates
Rr692261	regulatory region 692261	371 bp proximal
Rr692262	regulatory region 692262	855 bp proximal
Tssr161429	transcription start site region 161429	715 bp upstream
Tssr161430	transcription start site region 161430	740 bp upstream