rs48406813 SNP Detail

Summary

• ID
  rs48406813
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:145284723 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ggtgacaga ataagacact ggtcttgagt
  ataacagaat atcattgggg atcacatcgt tgatattttt ccttgagtgg tagtgtttgt
  ttttcccctg ggtgtttatt ttatctactg tgtggttcct agctactcat gcagaattgg
  G
  tatgagtttc agcttacaga gtaggattta cgtcaaaaga gacattggtt agcttttctt
  acatggtttg tgccatcatt cccctagcat atctggcagg tagacaagat tttagccaaa
  ggttttgagg ctaggttgct tttcacattt                                 
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	LG/J	MSM/Ms	SM/J
ss147865478	ENSMUSSNP3428810	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		G
ss321414266	CHEV_4_145148056	CHEVERUD	SCREENING_POP	f	SNP		G		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	LG/J	MSM/Ms	SM/J
rs48406813					SNP	G	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:145284723 () rs orientation: forward

Symbol	Name	Function Class
Rr377362	regulatory region 377362	656 bp downstream
Rr398684	regulatory region 398684	within coordinates