rs48408493 SNP Detail

Summary

• ID
  rs48408493
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:15260422 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTCAC ATTCGCCATT ACAAGATGGC
  R
  CTGACATCCT GTGTTCTAAG TAGTA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss147129843	ENSMUSSNP5277477	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
ss324873421	CHEV_15_15190091	CHEVERUD	SCREENING_POP	f	SNP			G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs48408493					SNP	A	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:15260422 () rs orientation: forward

Symbol	Name	Function Class
D15Dcr5	DNA Segment, Chr 15, Derry C. Roopenian 5	646 bp distal
Rr390383	regulatory region 390383	within coordinates