rs48423084 SNP Detail

Summary

• ID
  rs48423084
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:126220671 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTGAG AGAGGGAGAA ATAGCCTTCT
  Y
  CAGGGGAGAG CACACCAATT GGTTA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323526641	CHEV_10_125821858	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs48423084					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:126220671 () rs orientation: forward

Symbol	Name	Function Class
Gm66003	predicted gene, 66003	within coordinates
Gm67983	predicted gene, 67983	1600 bp upstream
Rr213438	regulatory region 213438	271 bp distal
Rr213439	regulatory region 213439	1730 bp proximal
Rr221931	regulatory region 221931	1742 bp proximal