rs48424872 SNP Detail

Summary

• ID
  rs48424872
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:115236732 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G GGTTACCTCA CTCAGGATAA TGCCCTCCAG GTCTAAGCAT
  TTGTCTAGGA ATTTCATAAA TTCATTTTTT TTAATAGCTG AGTAGTATTC CATTGTGTAA
  R
  TGTACCACAT TTTTGTATCC ATTCCTCTGT TGAGGGGCAT CTGGGTTCTT TCCAGCTTCT
  GGCTATTATA AATAAAGCTG CTATGAACAT AAGGGAGCAT G                    
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss147273461	ENSMUSSNP1933905	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs48424872					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:115236732 () rs orientation: forward

Symbol	Name	Function Class
Rr377034	regulatory region 377034	414 bp downstream