rs48426973 SNP Detail

Summary

• ID
  rs48426973
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:176539772 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCGAG TGCTGGGATT AAAGGCGTGC
  A
  CCACCACGCC TGGCTAGACA TGTGG                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss146339975	ENSMUSSNP3532495	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
SNP Consensus Information
SNP					Consensus Type	A/J
rs48426973					SNP	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:176539772 () rs orientation: forward

Symbol	Name	Function Class
Rr396622	regulatory region 396622	359 bp upstream
Rr423899	regulatory region 423899	281 bp proximal
Rr423900	regulatory region 423900	370 bp proximal