rs48434076 SNP Detail

Summary

• ID
  rs48434076
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:79212339 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGACAGAGCA ACATAACCCT
  TTAGAAAATC TTCTGTCTAA AAAAACGAGC ACAGTGCTCA TCTGTCGGTG ACTGTGGGCA
  TGTGGGCATG TGCAGGTGAA GTCAGAGGAC AAACACGGGT GTCACCTGGT GCTGGGGATG
  GCTCTCATGT CCCTGTGCTT GTGCAGTCTG TACTTTGCAG ACGGGCTGTC TCTCCAGGCC
  R
  GAGATTCTGA GATTCTTTCG GGCTTGATAA CTTGATATAG TGTATTACAT TGTTGTGCTG
  AGATTCTTTC GGGTTTGATA ATGTGATACA GTGTAATACA TGTTGTGCTT TTACCTCTGA
  CTTAGTTCTC TGTGTGTGCT TGTTTTGAAA CAGGATCTTA TTGTGTAGAC AAGACTGGCC
  TCCAATTTTC TTTTCTTTCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	KK/HlJ	LG/J	NOD/ShiLtJ	PWD/PhJ	SM/J
ss52474191	NES15653493	PERLEGEN	MM_PANEL2	f	SNP	G		A	G
ss322720226	CHEV_8_81009609	CHEVERUD	SCREENING_POP	f	SNP		G			A
SNP Consensus Information
SNP					Consensus Type	KK/HlJ	LG/J	NOD/ShiLtJ	PWD/PhJ	SM/J
rs48434076					SNP	G	G	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52474191	NES15653493	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:79212339 () rs orientation: forward

Symbol	Name	Function Class
Gm2225	predicted gene 2225	324 bp downstream