rs48439526 SNP Detail

Summary

• ID
  rs48439526
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  127
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:68733816 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ACATAAACAG AATAGCCCAG ACTAAAGGAT GGCAGGCAAG
  CTGTCTGGAT ACCCAGTTAC TTGACATGAG TCTCATTCAA GAAAAGAACT CTTGCTCCAA
  S
  TCCCAAGTTT GAGTTCAGCT TCTTCTGCCT ATGACATTCA GTTCACTTCA AGATGACTTT
  TGTGGCCTTC TGTTAGTAGC TGCATTTGAC AACTGACCCG                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ
ss62444786	NES17256930	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	G	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ
rs48439526					SNP	C	C	C	C	C	C	C	C	G	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss62444786	NES17256930	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:68733816 () rs orientation: forward

Symbol	Name	Function Class
Adam7	a disintegrin and metallopeptidase domain 7	969 bp downstream
Gm31227	predicted gene, 31227	within coordinates
Rr494580	regulatory region 494580	1952 bp distal
Tssr129424	transcription start site region 129424	1651 bp downstream